1#ifndef STAN_MATH_MIX_FUNCTOR_LAPLACE_BASE_RNG_HPP
2#define STAN_MATH_MIX_FUNCTOR_LAPLACE_BASE_RNG_HPP
43template <
bool ReturnMeanAndCovCholesky =
false,
typename LLFunc,
44 typename LLArgs,
typename CovarFun,
typename CovarArgs,
45 bool InitTheta,
typename RNG,
46 require_t<is_all_arithmetic_scalar<CovarArgs, LLArgs>>* =
nullptr>
48 CovarFun&& covariance_function,
49 CovarArgs&& covar_args,
51 RNG& rng, std::ostream* msgs) {
53 [msgs, &covariance_function](
auto&&... args) {
54 return covariance_function(std::forward<
decltype(args)>(args)..., msgs);
56 std::forward<CovarArgs>(covar_args));
58 ll_fun, std::forward<LLArgs>(ll_args), covariance_train, options, msgs);
59 Eigen::VectorXd mean_train = covariance_train * md_est.theta_grad;
60 Eigen::MatrixXd Sigma;
61 if (md_est.solver_used == 1) {
63 = md_est.L.template triangularView<Eigen::Lower>().solve(
64 md_est.W_r * covariance_train);
65 Sigma = covariance_train - V_dec.transpose() * V_dec;
66 }
else if (md_est.solver_used == 2) {
67 Eigen::MatrixXd C = md_est.L.template triangularView<Eigen::Lower>().solve(
68 md_est.K_root.transpose());
69 Sigma = C.transpose() * C;
71 Sigma = covariance_train
75 * md_est.LU.solve(covariance_train * md_est.W_r))
78 if constexpr (ReturnMeanAndCovCholesky) {
80 return std::make_tuple(std::move(mean_train), std::move(Sigma_chol));
StdVectorBuilder< true, Eigen::VectorXd, T_loc >::type multi_normal_rng(const T_loc &mu, const Eigen::Matrix< double, Eigen::Dynamic, Eigen::Dynamic > &S, RNG &rng)
Return a multivariate normal random variate with the given location and covariance using the specifie...
Reference for calculations of marginal and its gradients: Margossian et al (2020),...
auto laplace_marginal_density_est(LLFun &&ll_fun, LLTupleArgs &&ll_args, CovarMat &&covariance, const laplace_options< InitTheta > &options, std::ostream *msgs)
For a latent Gaussian model with hyperparameters phi and latent variables theta, and observations y,...
auto laplace_base_rng(LLFunc &&ll_fun, LLArgs &&ll_args, CovarFun &&covariance_function, CovarArgs &&covar_args, const laplace_options< InitTheta > &options, RNG &rng, std::ostream *msgs)
In a latent gaussian model,.
matrix_cl< double > cholesky_decompose(const matrix_cl< double > &A)
Returns the lower-triangular Cholesky factor (i.e., matrix square root) of the specified square,...
constexpr decltype(auto) apply(F &&f, Tuple &&t, PreArgs &&... pre_args)
The lgamma implementation in stan-math is based on either the reentrant safe lgamma_r implementation ...