Index

A

add() (cmdstanpy.compilation.CompilerOptions method)

add_include_path() (cmdstanpy.compilation.CompilerOptions method)

C

chain_ids (cmdstanpy.CmdStanGQ property) (cmdstanpy.CmdStanMCMC property) (cmdstanpy.stanfit.RunSet property) chains (cmdstanpy.CmdStanGQ property) (cmdstanpy.CmdStanMCMC property) (cmdstanpy.stanfit.RunSet property) cmd() (cmdstanpy.stanfit.RunSet method) cmdstan_config (cmdstanpy.stanfit.InferenceMetadata property) cmdstan_path() (in module cmdstanpy) cmdstan_version() (in module cmdstanpy) CmdStanArgs (class in cmdstanpy.cmdstan_args) CmdStanGQ (class in cmdstanpy) CmdStanLaplace (class in cmdstanpy) CmdStanMCMC (class in cmdstanpy) CmdStanMLE (class in cmdstanpy) CmdStanModel (class in cmdstanpy) CmdStanPathfinder (class in cmdstanpy) cmdstanpy module CmdStanVB (class in cmdstanpy) code() (cmdstanpy.CmdStanModel method)

column_names (cmdstanpy.CmdStanGQ property) (cmdstanpy.CmdStanLaplace property) (cmdstanpy.CmdStanMCMC property) (cmdstanpy.CmdStanMLE property) (cmdstanpy.CmdStanPathfinder property) (cmdstanpy.CmdStanVB property) columns (cmdstanpy.CmdStanVB property) compile() (cmdstanpy.CmdStanModel method) compile_stan_file() (in module cmdstanpy) CompilerOptions (class in cmdstanpy.compilation) compose() (cmdstanpy.cmdstan_args.LaplaceArgs method) (cmdstanpy.cmdstan_args.OptimizeArgs method) (cmdstanpy.cmdstan_args.PathfinderArgs method) (cmdstanpy.cmdstan_args.SamplerArgs method) (cmdstanpy.cmdstan_args.VariationalArgs method) (cmdstanpy.compilation.CompilerOptions method) compose_command() (cmdstanpy.cmdstan_args.CmdStanArgs method) cpp_options (cmdstanpy.CmdStanModel property) (cmdstanpy.compilation.CompilerOptions property) create_inits() (cmdstanpy.CmdStanPathfinder method) csv_files (cmdstanpy.stanfit.RunSet property)

D

diagnose() (cmdstanpy.CmdStanMCMC method) diagnostic_files (cmdstanpy.stanfit.RunSet property) divergences (cmdstanpy.CmdStanMCMC property) draws() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method) (cmdstanpy.CmdStanPathfinder method)

draws_pd() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanMCMC method) draws_xr() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method)

E

eta (cmdstanpy.CmdStanVB property)

exe_file (cmdstanpy.CmdStanModel property) exe_info() (cmdstanpy.CmdStanModel method)

F

format() (cmdstanpy.CmdStanModel method)

format_stan_file() (in module cmdstanpy) from_csv() (in module cmdstanpy)

G

generate_quantities() (cmdstanpy.CmdStanModel method)

get_err_msgs() (cmdstanpy.stanfit.RunSet method)

I

InferenceMetadata (class in cmdstanpy.stanfit) install_cmdstan() (in module cmdstanpy)

is_empty() (cmdstanpy.compilation.CompilerOptions method) is_resampled (cmdstanpy.CmdStanPathfinder property)

L

laplace_sample() (cmdstanpy.CmdStanModel method)

LaplaceArgs (class in cmdstanpy.cmdstan_args) log_prob() (cmdstanpy.CmdStanModel method)

M

max_treedepths (cmdstanpy.CmdStanMCMC property) metadata (cmdstanpy.CmdStanGQ property) (cmdstanpy.CmdStanLaplace property) (cmdstanpy.CmdStanMCMC property) (cmdstanpy.CmdStanMLE property) (cmdstanpy.CmdStanPathfinder property) (cmdstanpy.CmdStanVB property) method (cmdstanpy.stanfit.RunSet property) method_variables() (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method) (cmdstanpy.CmdStanPathfinder method)

method_vars (cmdstanpy.stanfit.InferenceMetadata property) metric (cmdstanpy.CmdStanMCMC property) metric_type (cmdstanpy.CmdStanMCMC property) mode (cmdstanpy.CmdStanLaplace property) model (cmdstanpy.stanfit.RunSet property) module cmdstanpy

N

name (cmdstanpy.CmdStanModel property) num_draws_sampling (cmdstanpy.CmdStanMCMC property)

num_draws_warmup (cmdstanpy.CmdStanMCMC property) num_procs (cmdstanpy.stanfit.RunSet property)

O

one_process_per_chain (cmdstanpy.stanfit.RunSet property) optimize() (cmdstanpy.CmdStanModel method) OptimizeArgs (class in cmdstanpy.cmdstan_args) optimized_iterations_np (cmdstanpy.CmdStanMLE property)

optimized_iterations_pd (cmdstanpy.CmdStanMLE property) optimized_params_dict (cmdstanpy.CmdStanMLE property) optimized_params_np (cmdstanpy.CmdStanMLE property) optimized_params_pd (cmdstanpy.CmdStanMLE property)

P

pathfinder() (cmdstanpy.CmdStanModel method)

PathfinderArgs (class in cmdstanpy.cmdstan_args) profile_files (cmdstanpy.stanfit.RunSet property)

R

rebuild_cmdstan() (in module cmdstanpy)

RunSet (class in cmdstanpy.stanfit)

S

sample() (cmdstanpy.CmdStanModel method) SamplerArgs (class in cmdstanpy.cmdstan_args) save_csvfiles() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method) (cmdstanpy.CmdStanMLE method) (cmdstanpy.CmdStanPathfinder method) (cmdstanpy.CmdStanVB method) (cmdstanpy.stanfit.RunSet method) set_cmdstan_path() (in module cmdstanpy) set_make_env() (in module cmdstanpy) show_versions() (in module cmdstanpy) src_info() (cmdstanpy.CmdStanModel method) stan_file (cmdstanpy.CmdStanModel property) stan_variable() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method) (cmdstanpy.CmdStanMLE method) (cmdstanpy.CmdStanPathfinder method) (cmdstanpy.CmdStanVB method)

stan_variables() (cmdstanpy.CmdStanGQ method) (cmdstanpy.CmdStanLaplace method) (cmdstanpy.CmdStanMCMC method) (cmdstanpy.CmdStanMLE method) (cmdstanpy.CmdStanPathfinder method) (cmdstanpy.CmdStanVB method) stan_vars (cmdstanpy.stanfit.InferenceMetadata property) stanc_options (cmdstanpy.CmdStanModel property) (cmdstanpy.compilation.CompilerOptions property) stdout_files (cmdstanpy.stanfit.RunSet property) step_size (cmdstanpy.CmdStanMCMC property) summary() (cmdstanpy.CmdStanMCMC method)

T

thin (cmdstanpy.CmdStanMCMC property)

U

user_header (cmdstanpy.CmdStanModel property) (cmdstanpy.compilation.CompilerOptions property)

V

validate() (cmdstanpy.cmdstan_args.CmdStanArgs method) (cmdstanpy.cmdstan_args.LaplaceArgs method) (cmdstanpy.cmdstan_args.OptimizeArgs method) (cmdstanpy.cmdstan_args.PathfinderArgs method) (cmdstanpy.cmdstan_args.SamplerArgs method) (cmdstanpy.cmdstan_args.VariationalArgs method) (cmdstanpy.compilation.CompilerOptions method) validate_cpp_opts() (cmdstanpy.compilation.CompilerOptions method)

validate_stanc_opts() (cmdstanpy.compilation.CompilerOptions method) validate_user_header() (cmdstanpy.compilation.CompilerOptions method) variational() (cmdstanpy.CmdStanModel method) variational_params_dict (cmdstanpy.CmdStanVB property) variational_params_np (cmdstanpy.CmdStanVB property) variational_params_pd (cmdstanpy.CmdStanVB property) variational_sample (cmdstanpy.CmdStanVB property) variational_sample_pd (cmdstanpy.CmdStanVB property) VariationalArgs (class in cmdstanpy.cmdstan_args)

W

write_stan_json() (in module cmdstanpy)